CDS

Accession Number TCMCG016C10668
gbkey CDS
Protein Id OMO83372.1
Location join(20693..21092,21212..21299,21779..21854,22051..22115,22213..22251,22369..22469,22541..22682,23522..23583,23658..23731,23815..23885,24513..24600,24670..24742,24835..24927,25413..25521,25955..26048,26137..26220,26308..26464,26661..26848,27113..27157,27409..27437,27516..27637,27805..27852,29082..29206,29312..29332,29449..29600,29872..30805,30920..30991,31265..31402)
Organism Corchorus capsularis
locus_tag CCACVL1_11410

Protein

Length 1229aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009868.1
Definition Helicase-like, DEXD box c2 type [Corchorus capsularis]
Locus_tag CCACVL1_11410

EGGNOG-MAPPER Annotation

COG_category L
Description Fanconi anemia group J protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K15362        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03440        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000018        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006282        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010569        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:2000779        [VIEW IN EMBL-EBI]
GO:2001020        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGTAGCAGCGGATGGAGCGAACCCCACCGCCAACCCTAACCCTAACCCTAACATCACGAACTCCGAGAATCCCAAAAATGTATACCAAGTTGCCGGAATTCCAGTGCAATTCCCCTACAAGCCGTACGGAACGCAGTTCACTTTCATGTACAGAGTGATATCAACCCTGGATCGAGCTCAGAAAGAGGGCCATTGTCACGCATTGCTTGAATCCCCCACTGGCACCGGCAAATCCCTCTCGCTTCTTTGCTCCACTCTAGCCTGGCAACAAAACAATAAGCTCAAGAATCTCAAGAATCTCCAGGCCCATTTGTCTCACTCTACGCCTGCACCGGAGGCCATTACCGATCCCCTTGGTCACGGCGGTGGTTTTATCCCTGAAACTCAACCTTCAAGCATTCCAACTTCCGGGATTTCAGAGCCACCCAAAATTTCTGCAACTAGCAAGAATAGCAACAAGACTCCTGTCGTATATTATGCTTCGAGGACACATTCGCAAATTTCTCAAGTGATTCGTGAATACAGGAAAACTTCTTATCGAGTGCCAATGGCAGTATTGGCTTCAAGGAAACATTATTGCACGAATCCATACATACTTGGAAAGGAGAATATTGATGAAGAATGCAAGCTTCTTTTGAAGAATCAACAATGCTCTGAATTTAAAAATATGCATAAAGTCAAATGTCATCTTTCACTTCAAAAAGGAGCCTGCCACGAGGCCCATGATATTGAAGATCTTGTTAAAGTTGGACAAGTTGTTAAAGGATGTGCGTACTATGCAGCACGCTCAATGGCAGATAGCGCACAATTGGTTTTTTGCCCATATAACTACATCATCAATCCTGTTATTCGAGGAGCAATGGATGTAGATATTAAGGGAGCCATTATAGTTCTTGATGAAGCTCACAATATTGAGGATATTGCCCGCGACGCTGGTAGTGTAGATCTTGAAGAAGATGCTTTGCTAAAACTGCAGACTGAGCTACAGCAAATCTACCAGTTTGATGCCACAATTTACCAACCATTGCACGAAATGACACAGGACTTAATAGCGTGGATTGAGCAAAGAAAAAGCACATTAGAAGAGCGTGAATTTCAGCACTACTTCTCCTCCTGGACTGGTGACAAGGCATTAAGACAACTCCAAGAAGCTAACATTTCACAGCAGTGCTTCCCTATCTTGCTAGATTGTGCGACAAAGGCAATCAAAGCTTCTACAGATACCGAATCAGATGAACCTCATTTAAGTGGCATGTCTGTGATAACCTTGGAAGGGCTGTTCTCTTCACTGACGTATTTCTTCTCAAGAAATGGTTCTCACTTTTTTGATTATCAGCTTGCTCTACGACGATTTAAAAAGGATAGCAAAAATGCTTTCGGAAGCTGGACATGTTGTTTAAGTTTGTGGTGCTTGAATCCAGCAGTTGTTTTCAGAGACATTGCTGATCTTTCATTGTCCGTCATTTTAACATCTGGGACGTTATCACCAATGAATTCTTTCTCATCAGAGCTTGGAGTTCAGTTTGGTAACTGTTTGGAGGCTCCTCATGTTATTGATGTTAAATCCCAGGTCTGGTCTGCTGTAATCTCCCACAGTCCTGGTAATTATGTATTGGATGCTAGTTATAAAACATCTAACACATATGCTTTCCAGGATGCGCTTGGCAAATCCTTGGAAGAAATTTGCAAGATTGTTCCTGGTGGCTCGCTGATTTTCTTCCCCAGTTACAAGTTGATGGAGACACTATGCAAGCGATGGAAAGAAACGGGTCAATGGTCACGACTTAACGCAATAAAGCGCCTTTTTGTTGAGCCAAGAGGAGGGAGTCAGGAAGAATTTGAGACTGTTCTGAAAGGTTATTATGATTCAGTATCTCGAGGCAAGAAACCTGCTCTAGGGAGAAAGAGAAGGATTAAAAGAACAGATGACAATGCCATTGAGTCTACAGAAGTTACTAACCGTAAAGGAGCTGCTTTTCTTGGAGTTTTCCGAGGAAAGGTGTCAGAAGGCATAGATTTTTCTGATGATAATGCCAGAGTGGTTATAGCTGTTGGCATTCCCTTTCCAAATATAAATGATATTCAGGTGGCATTAAAGAAGCAATATAATAACACTTACAAGTCATCTAAAACCCTTCTCAGTGGAAGCGAGTGGTACTGCCAACAAGCCTTCAGAGCTTTAAATCAAGCTCTTGGAAGGTCTATACGTCATAAAGATGATTATGGAGCCATCATCCTACTAGATTGGCGATATGAGGAGGAAAGGAATCGAGCATACATTTCAAAGTGGTTAAAGCCAGCCATTAGAAAGTTTGAAAGTTTTGAGAAATCATTAGAGGAGCTAAGATCCTTTTTCAGAGATGTCAAGGACCTGGTTGGAAAGAATAAGCAACAACTTTCTTTGGCAAGATATGATGCCATTTTCTCCCAAATGAAGGCTCAAAGTGATCTTACAGTTCAGACAAGCGTGCAAGCAGGTACAGACAGGAACACATCCAAGGAATATATTGATCTAGAATGCAGCTCTCCAAAAGAGTCCCGGTCTTTTGAGACTTTATCCACGACATTTTCCAATGAAGATCCAGATTTAATCATCGTCAAAGAGACTCCTCCTTTTGGGGGTTCTGGCATCTCCGTAGCTAGTCCCAGCTCAGTATCTAAGGATGTGAACTCTAATTCAACTATAATTCATGTATCAACCAAGTCATCAGATCGGTTTTCAATTCATCCAATGTCTTCAACAAGCCTGAATGAAGTTCCTTCCACTTATGAATCTAGGAGAATGTTCACCCCTGAAAAAGATGTCAATCAGAATGCTTCCAGCCTGATACCGAAAATTGAATCTCCGTTGAATCTTAGTGTCTGTTCTTATATCCAAAAAAGGAGGAAATCTGTGGGTTCACCTTTCATTAACCTTGTTAACGAAGAATGCACTGATTCTCCTGCTAAAGTTCCAGTTTCTAGGAGTTTCAAGGAAAACTTACTAGCCAACAGAGACATAACACGCAGAATGGAATTTGATTTCGAGACAGGTTCAGCTGAAAACAACCCCAAAACACCTCAGTCATTGGCCACTGACGGTTCTTTATTCTCTTGTCCTGTCATGGACAAGAGTCTACAAATTTCTTGTTCACTCTGCAGAAGCCCTTTAGGCCGCCCTGAAAATCATCTGTATCTCAGTTGCTCATTGACTGCATCATCAAAAGTCTACCTGTTGTCGCTTTTGAAAGAGAGATCTATTTCTTTTGCTTCAAGTACGCCAACAACTGTACCAGTTATAATAACTGATGTTTCATCAGTTGATCCTAGACTCTGCAACAGAAGTCTTGAAGGTGACAGAGCTCAAGGCATTTGGCATGAAGATGATGGCTGTGTATTCAAAAATGTTTTTTGCCCCTTCTGCACTAACCCTGACAATTGTCTTGGAGTGCAAATTAAAGCAGCCGATGAAAAAAATGTCCAGTTGCTAAACAAGTTACTGCTTTATGTTGATTGTGTGGAAATTAGAAATTCTGAAGCAGCAGGAGATGAGGGTGCAAAGGATAATGTTAATAGCTCAAGCGTTGACAGAACTGCCGTCTTAAGTTCCATCGATAAGTTTGCATATTCCCCCAAGCAGCCAAACCTAGGAGGATGGAGGACTACAAAATCAAAGGTTACACAAAGAAACCCTTTGAGCTCTTAA
Protein:  
MSVAADGANPTANPNPNPNITNSENPKNVYQVAGIPVQFPYKPYGTQFTFMYRVISTLDRAQKEGHCHALLESPTGTGKSLSLLCSTLAWQQNNKLKNLKNLQAHLSHSTPAPEAITDPLGHGGGFIPETQPSSIPTSGISEPPKISATSKNSNKTPVVYYASRTHSQISQVIREYRKTSYRVPMAVLASRKHYCTNPYILGKENIDEECKLLLKNQQCSEFKNMHKVKCHLSLQKGACHEAHDIEDLVKVGQVVKGCAYYAARSMADSAQLVFCPYNYIINPVIRGAMDVDIKGAIIVLDEAHNIEDIARDAGSVDLEEDALLKLQTELQQIYQFDATIYQPLHEMTQDLIAWIEQRKSTLEEREFQHYFSSWTGDKALRQLQEANISQQCFPILLDCATKAIKASTDTESDEPHLSGMSVITLEGLFSSLTYFFSRNGSHFFDYQLALRRFKKDSKNAFGSWTCCLSLWCLNPAVVFRDIADLSLSVILTSGTLSPMNSFSSELGVQFGNCLEAPHVIDVKSQVWSAVISHSPGNYVLDASYKTSNTYAFQDALGKSLEEICKIVPGGSLIFFPSYKLMETLCKRWKETGQWSRLNAIKRLFVEPRGGSQEEFETVLKGYYDSVSRGKKPALGRKRRIKRTDDNAIESTEVTNRKGAAFLGVFRGKVSEGIDFSDDNARVVIAVGIPFPNINDIQVALKKQYNNTYKSSKTLLSGSEWYCQQAFRALNQALGRSIRHKDDYGAIILLDWRYEEERNRAYISKWLKPAIRKFESFEKSLEELRSFFRDVKDLVGKNKQQLSLARYDAIFSQMKAQSDLTVQTSVQAGTDRNTSKEYIDLECSSPKESRSFETLSTTFSNEDPDLIIVKETPPFGGSGISVASPSSVSKDVNSNSTIIHVSTKSSDRFSIHPMSSTSLNEVPSTYESRRMFTPEKDVNQNASSLIPKIESPLNLSVCSYIQKRRKSVGSPFINLVNEECTDSPAKVPVSRSFKENLLANRDITRRMEFDFETGSAENNPKTPQSLATDGSLFSCPVMDKSLQISCSLCRSPLGRPENHLYLSCSLTASSKVYLLSLLKERSISFASSTPTTVPVIITDVSSVDPRLCNRSLEGDRAQGIWHEDDGCVFKNVFCPFCTNPDNCLGVQIKAADEKNVQLLNKLLLYVDCVEIRNSEAAGDEGAKDNVNSSSVDRTAVLSSIDKFAYSPKQPNLGGWRTTKSKVTQRNPLSS